Key Features

  • Data Import: Analycyte supports the import of formatted output as Excel files, which include extracted features with tables of abundance and MFI (e.g., from OMIQ), or concatenated FCS files featuring clustering columns (e.g., from FlowJo). In both cases, it is necessary to load a “metadata” table specifying sample information. It is also possible to load a table describing the cluster descriptors.

  • Exploratory and Supervised Analyses: Analycyte facilitates both exploratory and supervised analyses of features, allowing for deeper insights into your cytometry data.

  • Standardized and Reproducible Reporting: Quickly generate standardized and informative reports to ensure consistency and clarity in your analyses.

  • User Interaction Tracking: The parameters selected for report generation are recorded in .yml files in each hashed folder.

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Analyses will be exported along with a spreadsheet that describes the steps followed by each user.

  • Access to Template Documents: Each analysis folder retrieved from the application contains a progs folder with the .qmd template documents used for report creation.

  • Access to Analysis Environment: Each analysis folder retrieved from the application is accompanied by an .Rproj file.